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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs587437 chr6:158070339 C/T EIF5B chr2:99953816-100017789:+ -0.35 -7.68 8.89E-14 Box Plot
THCA rs587437 chr6:158070339 C/T POU2F1 chr1:167190066-167396582:+ -0.28 -6.59 1.14E-10 Box Plot
THCA rs587437 chr6:158070339 C/T RPL39 chrX:118920467-118925606:- 0.23 6.31 6.35E-10 Box Plot
THCA rs5875110 chr6:26563450 AT/A ZNF322B chr9:99957633-99961910:- 0.58 11.37 1.09E-26 Box Plot
THCA rs58794174 chr2:101184774 GTCAAAGGTTTGAGCCTGGG LOC285359 chr3:101431278-101432259:+ 0.56 13.67 3.74E-36 Box Plot
THCA rs588217 chr11:77583376 A/G INTS4L1 chr7:64601603-64694600:+ -0.58 -9.63 3.42E-20 Box Plot
THCA rs58824135 chr22:24042580 C/G IGLL3 chr22:25713888-25716191:+ 0.69 9.76 1.24E-20 Box Plot
THCA rs58832747 chr2:132206905 C/G CCDC74B chr2:130896860-130902707:- 0.36 6.22 1.1E-9 Box Plot
THCA rs588458 chr11:49214048 C/A FOLH1B chr11:89372395-89431886:+ 0.36 6.21 1.18E-9 Box Plot
THCA rs58869268 chr8:11797095 G/C SGK223 chr8:8175258-8244008:- -0.46 -8.6 1.13E-16 Box Plot
THCA rs58884411 chr6:151778026 T/C NEK5 chr13:52607747-52703214:- 0.58 6.91 1.59E-11 Box Plot
THCA rs58886455 chr2:132262419 A/AG CCDC74B chr2:130896860-130902707:- 0.4 7.12 3.97E-12 Box Plot
THCA rs5889350 chr8:10773017 CT/C SGK223 chr8:8175258-8244008:- 0.35 6.97 1.05E-11 Box Plot
THCA rs5889371 chr8:11353110 AG/A SGK223 chr8:8175258-8244008:- -0.39 -6.72 5.07E-11 Box Plot
THCA rs58936515 chr2:101118600 A/T LOC285359 chr3:101431278-101432259:+ 0.34 6.57 1.29E-10 Box Plot